How HPC Can Help Tap the Power of Ocean Waves

“What’s amazing about ocean wave energy is the enormity of the resource sitting there,” says Ashkan Rafiee. “Whoever solves this riddle will make a huge impact on the world.” Dr. Rafiee is the hydrodynamics team leader for Carnegie Clean Energy — an Australian wave, solar and battery energy company well on its way to making wave power a reality. For the last decade, Carnegie has been developing a wave energy device that converts ocean swell into zero-emission, renewable power and desalinated freshwater. Dubbed “CETO,” the device is already in use off of Western Australia’s Garden Island, helping power the country’s largest naval base. But deploying wave energy technology at scale is another matter. “The potential is phenomenal,” says ... [ Read More ]

Data-Intensive Computing to Simulate the Brain

Understanding how the human brain works will take more than brains. Along with the planet’s smartest scientific minds, it will take never-before-achieved computing capabilities. The science and technology required to decode the human brain is a scientific final frontier …  and Professor Dr. Dirk Pleiter is on the front lines. The theoretical physics professor and research group leader at the Jülich Supercomputing Centre (JSC) in Jülich, Germany, is part of the Human Brain Project (HBP), a 10-year-long European research initiative tasked with creating a working simulation of the brain. “Understanding the human brain is one of the greatest challenges facing 21st century science,” states the HBP’s report to the European Commission. “If ... [ Read More ]

Bio-IT World 2017: Life Sciences Embrace Cloud

Hope you had a chance to attend the 16th annual, three-day Boston Bio-IT World Conference & Expo this year. Competitions included: Best Practices awards announcements and the Benjamin Franklin Award, and the show planners named the 2017 Best of Show winners. Tracks for the conference included: data and storage management, cloud computing, networking hardware, bioinformatics, next-gen sequencing informatics, data security and more. Face to face As many times as I’ve walked Bio-IT’s exhibit hall floor, the excitement of seeing in person someone I’ve been interacting with via email and phone – in some cases for years – and hearing their thoughts still pumps me up. True, social media has diminished the impact of conferences, but the ... [ Read More ]

Hail Powers Precision Medicine on the Urika-GX Platform

Hail is an open-source platform for analyzing variants in genomic data on top of Apache Spark™. It takes advantage of three key elements of Spark’s design: Scalability. Datasets are multi-terabyte and growing rapidly. Simpler APIs. They hide the complexity of distributed computing and parallel execution, and let biologists explore data using familiar biological terms. Algorithms for large-scale linear algebra and ML. Performant code leverages both linear algebra legacy and custom libraries (for example, Cray compilers and tools). Hail provides a parallel Scala API as well as parallel Python API, and adds powerful, expressive high-level layers that include: fast, easy data ingest in various data formats, especially if you’re ... [ Read More ]

Leidos and Cray to Offer Multi-Level Security Solutions

Cray and Leidos, a global science and technology solutions leader, have signed a strategic alliance agreement to offer Multi-Level Security (MLS) solutions that include the Cray® CS™ series of cluster supercomputers to federal and commercial customers. Customers are facing rapidly evolving challenges: increasing cyberattacks, a competition-driven need to reduce time to market and a constant focus on increasing efficiencies. Through this strategic alliance, Leidos and Cray can now work together to expand current MLS solutions that are designed to give customers the ability to: Manage risk and collaborate more efficiently by allowing teams at varying security clearances to access the same system in a single environment, while ... [ Read More ]